Integrated Analysis

Packages
	Alphafold_analysis
	Here you should put an abstract of your package Reference Manual – User Manual . Authors: F. Cazals and E. Sarti
	Binding_affinity_prediction
	Binding_affinity_prediction is package implementing a complete workflow to predict affinities from geometrical and biophysical parameters using bound and unbound crystallographic structures. It generates and evaluates linear models using various combinations of these parameters and selects the most accurate ones. Reference Manual – User Manual . Authors: S. Marillet and P. Boudinot and F. Cazals
	FunChaT
	A package to build biased HMMs by exploiting the results of Structural motifs. Reference Manual – User Manual . Authors: R. Tetley and F. Cazals
	Genetrank
	Gene ranking based on random walk with restarts in Protein Protein Interaction Networks Reference Manual – User Manual . Authors: F. Cazals and A. Jean-Marie and D. Mazauric and J. Roux and G. Sales Santa Cruz
	Molecular_cradle
	A package to identify almost rigid regions in complex biomolecules Reference Manual – User Manual . Authors: M. Simsir and F. Cazals
	Multiple_interface_string_alignment
	MISA provide a coloring of interface strings ie amino acids found at interfaces with various biological and biophysical quantities. Reference Manual – User Manual . Authors: S. Bereux and F. Cazals
	PDB_utilities
	Various utils providing simple manipulations on PDB files Reference Manual – User Manual . Authors: F. Cazals

Description

Applications combining several ingredients from the previous groups.

None.