Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
Here is a list of all documented functions with links to the class documentation for each member:
- l -
labels_begin() :
T_Hierarchical_labels_forest< MolecularSystemLabelsTraits >
labels_end() :
T_Hierarchical_labels_forest< MolecularSystemLabelsTraits >
lambda_matrix() :
lambda_matrix< graph >
layer_begin() :
T_Directed_acyclic_graph_with_layers< VertexProperty, EdgeProperty >
layer_end() :
T_Directed_acyclic_graph_with_layers< VertexProperty, EdgeProperty >
leaders_begin() :
T_Union_find_base< T, VertexDS, InternalVertexTag >
,
T_Union_find_contains_with_map< T >
leaders_end() :
T_Union_find_base< T, VertexDS, InternalVertexTag >
,
T_Union_find_contains_with_map< T >
load() :
T_Bicolor_interface_oserialization< BicolorInterface >
,
T_Mediated_interface_oserialization< MediatedInterface >
,
T_Molecular_interface_connected_component_oserialization< MolecularInterface >
,
T_Molecular_interface_oserialization< MolecularInterface >
,
T_Tricolor_interface_oserialization< TricolorInterface >
,
Loader_base
,
T_Archive_file_loader< InputArchive, SerializedData >
,
T_Biomolecule_representation_loader< ProteinRepresentation, NucleicAcidRepresentation, MCSLoader >
,
T_Conformation_loader< Conformation_builder_ >
,
T_Molecular_covalent_structure_loader< Molecular_covalent_structure_builder_ >
,
T_Molecular_covalent_structure_loader_from_MOL< MolecularCovalentStructure >
,
T_Molecular_system_loader< Molecular_system_ >
,
T_Multiple_archives_xml_archive_file_loader< SecondaryArchive, SecondaryData, SerializedData >
,
T_Nucleic_acid_representation_loader< NucleicAcidRepresentation, MCSLoader >
,
T_Numbers_file_loader< FT, Tag >
,
T_Primitive_labels_loader< PartnerLabelsTraits, MediatorLabelsTraits, ExtraLabelsTraits >
,
T_Protein_representation_loader< ProteinRepresentation, MCSLoader >
,
T_Transition_graph_loader< InputArchive, TransitionGraphTraits >
,
No_particle_annotator
,
T_Domain_annotator_for_particles< Annotations >
,
T_Dynamic_annotator_for_atoms< SetDynamicAnnotation >
,
T_Dynamic_annotator_for_residues< SetDynamicAnnotation >
,
T_Generic_annotator< KeyType, AnnotationType, MakeKey, SetAnnotation, GetOptionName, GetOptionHelp, GetOptionDisplayName >
,
T_Generic_annotator_without_file< AnnotationType, SetAnnotation, GetInstanceName >
,
T_Graph_loader< GraphType, FT >
,
T_Name_annotator_for_atoms< SetAnnotatedName >
,
T_Name_annotator_for_pseudo_atoms< SetAnnotatedName >
,
T_Particle_annotator_collector< ParticleAnnotator1, ParticleAnnotator2 >
,
T_Points_d_file_loader< PointD >
,
T_Points_d_file_loader_generic< PointD, PointD_filler >
,
T_Radius_annotator_for_particles_with_annotated_name< NT, SetRadius >
,
T_Spheres_3_file_loader< Sphere3, Point3 >
,
T_XTC_file_loader< ConformationType, ConformationBuilder, ESBTLMolecularSystem, PDBLineFormat >
,
T_Bicolor_interface_oserialization< MolecularInterfaceBuilder >
,
T_Mediated_interface_oserialization< MolecularInterfaceBuilder >
,
T_Module_based_workflow< Dummy >
,
T_Tricolor_interface_oserialization< MolecularInterfaceBuilder >
load_dataset() :
BM_Batch
load_dict_of_solutions_from_file() :
MCI_solutions
load_from_directory() :
BM_Dataset
,
PALSE_xml_DB
load_molecular_covalent_structures() :
T_Molecular_covalent_structure_loader< Molecular_covalent_structure_builder_ >
load_molecular_systems() :
T_Molecular_system_loader< Molecular_system_ >
load_override() :
T_Multiple_archives_serialization_xml_iarchive< DataType, InputArchive >
load_PDB_file() :
BioPDB_vs_XML_Etree
load_PDB_files() :
BioPDB_vs_XML_Etree
load_PDB_files_from_directory() :
BioPDB_vs_XML_Etree
load_run_specification() :
BM_Batch
load_seqan_substitution_matrix() :
T_Alignment_engine_sequences_seqan< SequenceType, SeqanSequenceConverter, FreeEndsAlignment, ScoreType, SeqanUnitType, SeqanCustomMatrix, SeqanAlgorithm >
load_substitution_matrix() :
T_Alignment_engine< SequenceOrStructure, AlignerAlgorithm, FT >
log() :
T_Module_based_workflow< Dummy >
lr_sgd_solve() :
problem< graph, dp_mat, lambda_mat, parameter >
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