T_Dynamic_annotator_for_atoms< SetDynamicAnnotation > Class Template Reference

Model of ParticleAnnotator for attributing any annotation to a particle dynamically. More...

#include <Dynamic_annotator_for_atoms.hpp>

Classes
class	Dynamic_annotation
class	T_Annotations_with_dynamic
	Default class for representing dynamic annotations (it refines a base class of annotations) More...
class	T_Annotations_with_dynamic< void, DynamicAnnotation >
	Default class for representing dynamic annotations (it is a base class of annotations) More...

Public Types
enum	Key_element_type {   CHAIN_TYPE = 2 , RES_NAME_TYPE = 3 , RES_ID_TYPE = 5 , ATOM_NAME_TYPE = 7 ,   ATOM_ID_TYPE = 11 , ELEMENT_TYPE = 13 }
typedef T_Dynamic_annotator_for_atoms< SetDynamicAnnotation >	Self
typedef SBL::IO::Loader_base	Base
typedef unsigned	Key_type

Static Public Member Functions
static boost::program_options::options_description *&	get_options (void)
	Access to the options' description of the module. More...
static bool	has_options (void)
static void	delete_options (void)
static void	initialize_options (const std::string &caption)

Constructor / Destructor
	T_Dynamic_annotator_for_atoms (void)
	~T_Dynamic_annotator_for_atoms (void)

Requirements of Loader
bool	set_options (boost::program_options::options_description &options) const
boost::program_options::options_description	add_options (void) const
	Virtual method for adding options to the module. More...
bool	check_options (std::string &message) const
	Checks that the input options' values are coherent. More...
std::string	get_output_prefix (void) const
	Returns a prefix that concatains the input line options used when running the module. More...
bool	load (unsigned verbose, std::ostream &out)
	Loads the data. More...
std::string	get_name (void) const
	Return the name of the class itself. More...

Functor
template<class Particle >
void	operator() (Particle &p) const
Base *	get_annotator (const std::string &name)

Management
void	set_loader_instance_name (const std::string &loader_instance_name)
const std::string &	get_loader_instance_name (void) const

Detailed Description

template<class SetDynamicAnnotation = Set_dynamic_annotation_default>
class SBL::Models::T_Dynamic_annotator_for_atoms< SetDynamicAnnotation >

Model of ParticleAnnotator for attributing any annotation to a particle dynamically.

Member Typedef Documentation

Base

typedef SBL::IO::Loader_base Base

Key_type

typedef unsigned Key_type

Self

typedef T_Dynamic_annotator_for_atoms<SetDynamicAnnotation> Self

Member Enumeration Documentation

Key_element_type

enum Key_element_type

Enumerator
CHAIN_TYPE
RES_NAME_TYPE
RES_ID_TYPE
ATOM_NAME_TYPE
ATOM_ID_TYPE
ELEMENT_TYPE

Constructor & Destructor Documentation

T_Dynamic_annotator_for_atoms()

T_Dynamic_annotator_for_atoms ( void  )

inline

~T_Dynamic_annotator_for_atoms()

~T_Dynamic_annotator_for_atoms ( void  )

inline

Member Function Documentation

add_options()

boost::program_options::options_description add_options ( void  ) const

inlinevirtual

Virtual method for adding options to the module.

Reimplemented from T_Module_option_description< Dummy >.

check_options()

bool check_options ( std::string &  message ) const

inlinevirtual

Checks that the input options' values are coherent.

Reimplemented from T_Module_option_description< Dummy >.

delete_options()

static void delete_options ( void  )

inlinestaticinherited

get_annotator()

T_Dynamic_annotator_for_atoms< SetDynamicAnnotation >::Base * get_annotator ( const std::string &  name )

inline

get_loader_instance_name()

const std::string& get_loader_instance_name ( void  ) const

inlineinherited

get_name()

std::string get_name ( void  ) const

inlinevirtual

Return the name of the class itself.

Reimplemented from Loader_base.

get_options()

static boost::program_options::options_description*& get_options ( void  )

inlinestaticinherited

Access to the options' description of the module.

get_output_prefix()

std::string get_output_prefix ( void  ) const

inlinevirtual

Returns a prefix that concatains the input line options used when running the module.

Reimplemented from T_Module_option_description< Dummy >.

has_options()

static bool has_options ( void  )

inlinestaticinherited

initialize_options()

static void initialize_options ( const std::string &  caption )

inlinestaticinherited

load()

bool load ( unsigned  verbose, std::ostream &  out  )

inlinevirtual

Loads the data.

Reimplemented from Loader_base.

operator()()

void operator() ( Particle &  p ) const

inline

set_loader_instance_name()

void set_loader_instance_name ( const std::string &  loader_instance_name )

inlineinherited

set_options()

bool set_options ( boost::program_options::options_description &  options ) const

inline