Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
T_Dynamic_annotator_for_atoms< SetDynamicAnnotation > Class Template Reference

Model of ParticleAnnotator for attributing any annotation to a particle dynamically. More...

#include <Dynamic_annotator_for_atoms.hpp>

Classes

class  T_Annotations_with_dynamic
 Default class for representing dynamic annotations (it refines a base class of annotations) More...
 
class  T_Annotations_with_dynamic< void, DynamicAnnotation >
 Default class for representing dynamic annotations (it is a base class of annotations) More...
 

Static Public Member Functions

static boost::program_options::options_description *& get_options (void)
 Access to the options' description of the module. More...
 

Constructor / Destructor

 T_Dynamic_annotator_for_atoms (void)
 
 ~T_Dynamic_annotator_for_atoms (void)
 

Requirements of Loader

bool set_options (boost::program_options::options_description &options) const
 
boost::program_options::options_description add_options (void) override
 Virtual method for adding options to the module. More...
 
bool check_options (std::string &message) const override
 Checks that the input options' values are coherent. More...
 
std::string get_output_prefix (void) const override
 Returns a prefix that concatains the input line options used when running the module. More...
 
bool load (unsigned verbose, std::ostream &out) override
 Load function. More...
 
std::string get_name (void) const override
 Return the name of the class itself. More...
 

Functor

template<class Particle >
void operator() (Particle &p) const
 
Baseget_annotator (const std::string &name)
 

Management

void set_loader_instance_name (const std::string &loader_instance_name)
 
const std::string & get_loader_instance_name (void) const
 

Detailed Description

template<class SetDynamicAnnotation = Set_dynamic_annotation_default>
class SBL::Models::T_Dynamic_annotator_for_atoms< SetDynamicAnnotation >

Model of ParticleAnnotator for attributing any annotation to a particle dynamically.

Member Function Documentation

◆ add_options()

boost::program_options::options_description add_options ( void  )
inlineoverridevirtual

Virtual method for adding options to the module.

Reimplemented from T_Module_option_description< Dummy >.

◆ check_options()

bool check_options ( std::string &  message) const
inlineoverridevirtual

Checks that the input options' values are coherent.

Reimplemented from T_Module_option_description< Dummy >.

◆ get_name()

std::string get_name ( void  ) const
inlineoverridevirtual

Return the name of the class itself.

Reimplemented from Loader_base.

◆ get_options()

static boost::program_options::options_description*& get_options ( void  )
inlinestaticinherited

Access to the options' description of the module.

◆ get_output_prefix()

std::string get_output_prefix ( void  ) const
inlineoverridevirtual

Returns a prefix that concatains the input line options used when running the module.

Reimplemented from T_Module_option_description< Dummy >.

◆ load()

bool load ( unsigned  verbose,
std::ostream &  out 
)
inlineoverridevirtual

Load function.

Parameters
verboseVerbosity level.
[out]outOutput stream.
Returns
True if loading is successful, false otherwise. Function to call to execute the main function of a Loader

Reimplemented from Loader_base.