Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
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Model of ParticleAnnotator for attributing any annotation to a particle dynamically. More...
#include <Dynamic_annotator_for_atoms.hpp>
Classes | |
class | T_Annotations_with_dynamic |
Default class for representing dynamic annotations (it refines a base class of annotations) More... | |
class | T_Annotations_with_dynamic< void, DynamicAnnotation > |
Default class for representing dynamic annotations (it is a base class of annotations) More... | |
Static Public Member Functions | |
static boost::program_options::options_description *& | get_options (void) |
Access to the options' description of the module. More... | |
Constructor / Destructor | |
T_Dynamic_annotator_for_atoms (void) | |
~T_Dynamic_annotator_for_atoms (void) | |
Requirements of Loader | |
bool | set_options (boost::program_options::options_description &options) const |
boost::program_options::options_description | add_options (void) override |
Virtual method for adding options to the module. More... | |
bool | check_options (std::string &message) const override |
Checks that the input options' values are coherent. More... | |
std::string | get_output_prefix (void) const override |
Returns a prefix that concatains the input line options used when running the module. More... | |
bool | load (unsigned verbose, std::ostream &out) override |
Load function. More... | |
std::string | get_name (void) const override |
Return the name of the class itself. More... | |
Functor | |
template<class Particle > | |
void | operator() (Particle &p) const |
Base * | get_annotator (const std::string &name) |
Management | |
void | set_loader_instance_name (const std::string &loader_instance_name) |
const std::string & | get_loader_instance_name (void) const |
Model of ParticleAnnotator for attributing any annotation to a particle dynamically.
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inlineoverridevirtual |
Virtual method for adding options to the module.
Reimplemented from T_Module_option_description< Dummy >.
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inlineoverridevirtual |
Checks that the input options' values are coherent.
Reimplemented from T_Module_option_description< Dummy >.
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inlineoverridevirtual |
Return the name of the class itself.
Reimplemented from Loader_base.
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inlinestaticinherited |
Access to the options' description of the module.
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inlineoverridevirtual |
Returns a prefix that concatains the input line options used when running the module.
Reimplemented from T_Module_option_description< Dummy >.
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inlineoverridevirtual |
Load function.
verbose | Verbosity level. | |
[out] | out | Output stream. |
Reimplemented from Loader_base.