Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
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Loader for files listing numbers
More...
#include <Numbers_file_loader.hpp>
Public Types | |
typedef std::vector< std::vector< FT > > | Data_vector |
List of serialized data. More... | |
Static Public Member Functions | |
static boost::program_options::options_description *& | get_options (void) |
Access to the options' description of the module. More... | |
Constructors | |
T_Numbers_file_loader (const std::string &tag, const std::string &helper="Numbers file name", const std::string &option_name="numbers-file") | |
Default constructor. More... | |
Options Descriptions | |
bool | check_options (std::string &message) const override |
Check that the parsed options are valid for this loader. More... | |
Output Prefix | |
std::string | get_output_prefix (void) const override |
Access to the output prefix of this loader. More... | |
std::string | get_name (void) const override |
Return the name of the class itself. More... | |
Data Management | |
const Data_vector & | get_all_data (void) const |
Access to all the containers of spheres (const). More... | |
Data_vector & | get_all_data (void) |
Access to all the containers of spheres. More... | |
unsigned | get_number_of_data (void) const |
Number of containers of spheres. More... | |
const std::vector< FT > & | get_data (unsigned i) const |
ith container of spheres corresponding to the ith input file (const). More... | |
std::vector< FT > & | get_data (unsigned i) |
ith container of spheres corresponding to the ith input file. More... | |
const std::vector< FT > & | get_data (void) const |
Container of spheres (use only if one input file was provided) (const). More... | |
std::vector< FT > & | get_data (void) |
Container of spheres (use only if one input file was provided). More... | |
bool | load (unsigned verbose=false, std::ostream &out=std::cout) override |
Once the command line options were parsed, build the containers of spheres from the input files. More... | |
boost::program_options::options_description | add_options (void) override |
Virtual method for adding options to the module. More... | |
void | statistics (std::ostream &out) const |
Print high level statistics on the loaded spheres. More... | |
static std::vector< std::string > & | get_file_names (void) |
Access to the input filenames. More... | |
Management | |
void | set_loader_instance_name (const std::string &loader_instance_name) |
const std::string & | get_loader_instance_name (void) const |
Loader for files listing numbers
FT | Type of the numbers to load. |
typedef std::vector<std::vector<FT> > Data_vector |
List of serialized data.
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inline |
Default constructor.
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inlineoverridevirtual |
Virtual method for adding options to the module.
Reimplemented from T_Module_option_description< Dummy >.
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inlineoverridevirtual |
Check that the parsed options are valid for this loader.
Reimplemented from T_Module_option_description< Dummy >.
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inline |
Access to all the containers of spheres.
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inline |
Access to all the containers of spheres (const).
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inline |
ith container of spheres corresponding to the ith input file.
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inline |
ith container of spheres corresponding to the ith input file (const).
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inline |
Container of spheres (use only if one input file was provided).
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inline |
Container of spheres (use only if one input file was provided) (const).
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inlinestatic |
Access to the input filenames.
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inlineoverridevirtual |
Return the name of the class itself.
Reimplemented from Loader_base.
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inline |
Number of containers of spheres.
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inlinestaticinherited |
Access to the options' description of the module.
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inlineoverridevirtual |
Access to the output prefix of this loader.
Reimplemented from T_Module_option_description< Dummy >.
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inlineoverridevirtual |
Once the command line options were parsed, build the containers of spheres from the input files.
Reimplemented from Loader_base.
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inline |
Print high level statistics on the loaded spheres.