Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
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Compute the buried surface area of two given partners. More...
#include <Buried_surface_area.hpp>
Public Types | |
typedef T_Alpha_complex_of_molecular_model< ParticleTraits > | Alpha_complex |
Derived class from CGAL alpha-complex for filling it with particles. More... | |
Compute the buried surface area of two given partners.
Compute the buried surface area of two given partners
ParticleTraits | Model of the concept ParticleTraits. |
FT | Number type used for representing the buried surface area (default is intervals of double). |
typedef T_Alpha_complex_of_molecular_model<ParticleTraits> Alpha_complex |
Derived class from CGAL alpha-complex for filling it with particles.
It uses ParticleTraits for determining the geometrical kernel used for the representation and computation of the -complex, and for attaching atom data to their corresponding vertex.
ParticleTraits | Traits class defining geometric properties of a particle. |
TAlphaComplexVertexBase | Base class for representing a vertex in the 3D -complex. It has SBL::CSB::T_Alpha_complex_vertex_base_3 as default type. |
TAlphaComplexCellBase | Base class for representing a cell in the 3D -complex. It has SBL::CSB::T_Alpha_complex_cell_base_3 as default type. |
TAlphaComplexBase | Base template representation of the -complex it-self without biological context. It allows to switch easily between the class CGAL::Fixed_alpha_shape_3 and the class CGAL::Alpha_shape_3. It has SBL::CSB::T_Alpha_complex_base_3 as default type, that is a wrapper for using both CGAL data structures. |