Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
SBL Namespace Reference

[includes] More...

Namespaces

 Batch_manager
 
 Binding_affinity_utils
 
 CADS
 
 Colored_MISA
 
 Combinations_of_variables_model_evaluation
 
 Connectivity_inference_analysis
 
 Connectivity_inference_data_structures
 
 Connectivity_inference_engine
 
 CSB
 
 DB_hit_manager
 
 DB_manipulators
 
 Density_difference_based_clustering_commons
 
 EL_comparators
 
 EMD_comparators
 
 FunChat_hit_filters
 
 GT
 
 HMMER_Wrapper
 
 IO
 
 iRMSD
 
 lrmsd
 
 mci_serialize_pickle_xml
 
 mci_table
 
 mcibootstrap_iterative
 
 MinimumConnectivityInference
 
 MISA_ColorEngines
 
 Models
 
 Modules
 
 Molecular_cradle_step1
 
 Molecular_cradle_step2
 
 Molecular_cradle_step2_1
 
 Molecular_cradle_step2_selected
 
 Molecular_cradle_step3
 
 Molecular_cradle_utils_dendogram
 
 Molecular_cradle_utils_distance
 
 Molecular_cradle_utils_label_selection
 
 Molecular_distances_flexible-python
 
 Multiple_interface_string_alignment
 
 PALSE
 
 PDB_complex_to_unbound_partners_matchings
 
 Protein_complex_analysis_molecular_data_structures
 
 Rigid_blocks_sequence_analyzer
 
 Samples_2_generator
 
 SBL_Genetrank_application
 
 SBL_Genetrank_gene_radar_scatter_plot
 
 SBL_Genetrank_gene_to_protein
 
 SBL_Genetrank_network_statistical_analysis
 
 SBL_Genetrank_ppi_loader
 
 SBL_Genetrank_simulation
 
 SBL_Genetrank_simulation_statistics
 
 SBL_pytools
 
 Sequence_annotators
 
 Sequence_filters
 
 Space_filling_model_interface
 
 Spheres_d_generator
 
 Structural_motifs
 
 TG_builders
 
 TG_weights_from_normalized_boltzmann
 
 WL_ATM_plot
 

Functions

def get_env (name)
 accessing env variable More...
 
def get_env_or_die (name)
 
def make_modules_path (directory)
 Loading all modules of SBL, if they were not installed. More...
 

Variables

def SBL_DIR = get_env("SBL_DIR")
 
string SBL_APPLICATIONS_DIR = "%s/Applications" % SBL_DIR
 
string SBL_CORE_DIR = "%s/Core" % SBL_DIR
 

Packages

[includes]

Function Documentation

◆ get_env()

def SBL.get_env (   name)

accessing env variable

◆ get_env_or_die()

def SBL.get_env_or_die (   name)

◆ make_modules_path()

def SBL.make_modules_path (   directory)

Loading all modules of SBL, if they were not installed.

Variable Documentation

◆ SBL_APPLICATIONS_DIR

string SBL_APPLICATIONS_DIR = "%s/Applications" % SBL_DIR

◆ SBL_CORE_DIR

string SBL_CORE_DIR = "%s/Core" % SBL_DIR

◆ SBL_DIR

def SBL_DIR = get_env("SBL_DIR")