Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
Genetrank_GeneProteinTranslator Class Reference

Constructions

def __init__ (self, organism, direction)
 Default constructor. More...
 

Internal Methods

def strip_variant (self, identifier)
 Remove the variant piece of the identifier (everything starting from the '-') More...
 

Translate

def translate (self, identifiers, ignore_variant=False)
 

Detailed Description

Class that translates between identifier types (Requires a connection) Class that translates between gene ids and protein ids through use of the gProfiler API (Requires a connection)

Constructor & Destructor Documentation

◆ __init__()

def __init__ (   self,
  organism,
  direction 
)

Default constructor.

Member Function Documentation

◆ strip_variant()

def strip_variant (   self,
  identifier 
)

Remove the variant piece of the identifier (everything starting from the '-')