Genetrank_gene_radar Class Reference

Constructions
	__init__ (self, gene, target_results, background_norm, background_cmap, background_color_using='max', y_range=None, markers=['o', 'o'], marker_colors=['g', 'b'], ax=None)
	Default constructor.

Internal Methods
	get_spoke_angles (self)
	Get the angles for the spokes as a list.
	radians_to_degrees (self, angle)
	Convert from radians to degrees.

Presentation
	plot (self)
	Create the plot.
	show (self)
	Present the plot using matplotlib.
	save (self, outputfile_name='gene_radar.pdf', format='pdf')
	Save the plot to a file.

Detailed Description

Class for the generation of a gene scatter plot Class for the generation of a gene scatter plot from a gene, a pandas Data Frame containing the by-target results to plot, and the normalization guide and color map for the background

Constructor & Destructor Documentation

__init__()

__init__	(		self,
			gene,
			target_results,
			background_norm,
			background_cmap,
			background_color_using = 'max',
			y_range = None,
			markers = ['o', 'o'],
			marker_colors = ['g', 'b'],
			ax = None )

Default constructor.

Member Function Documentation

get_spoke_angles()

get_spoke_angles

(

self

)

Get the angles for the spokes as a list.

plot()

plot

(

self

)

Create the plot.

radians_to_degrees()

radians_to_degrees	(		self,
			angle )

Convert from radians to degrees.

save()

save	(		self,
			outputfile_name = 'gene_radar.pdf',
			format = 'pdf' )

Save the plot to a file.

show()

show

(

self

)

Present the plot using matplotlib.