MISA_constructor Class Reference

Public Attributes
	adir
	verbose
	prefix
	to_align
	file_specs
	bound_pdb_complexes
	pdb_id2path
	windows
	all_MISA
	all_MISA_ids

Constructions
def	__init__ (self, pdir, idir, odir, adir, verbose, prefix, to_align, file_specs, bound_pdb_complexes, pdb_id2path, windows)
	Default constructor. More...

Internal methods
def	gather_chains_by_MISA_id (self)
	Gather all the chain by the relevant MISA id. More...
def	run (self)
	Iterate over the MISA to run the processing More...

Detailed Description

Construct and process all the MISAs. Gather the different chains by MISA id and run the processing of each of them.

Constructor & Destructor Documentation

__init__()

def __init__	(		self,
			pdir,
			idir,
			odir,
			adir,
			verbose,
			prefix,
			to_align,
			file_specs,
			bound_pdb_complexes,
			pdb_id2path,
			windows
	)

Default constructor.

Member Function Documentation

gather_chains_by_MISA_id()

def gather_chains_by_MISA_id

(

self

)

Gather all the chain by the relevant MISA id.

run()

def run

(

self

)

Iterate over the MISA to run the processing

Member Data Documentation

adir

adir

all_MISA

all_MISA

all_MISA_ids

all_MISA_ids

bound_pdb_complexes

bound_pdb_complexes

file_specs

file_specs

pdb_id2path

pdb_id2path

prefix

prefix

to_align

to_align

verbose

verbose

windows

windows