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Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
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Public Attributes | |
adir | |
verbose | |
prefix | |
to_align | |
file_specs | |
bound_pdb_complexes | |
pdb_id2path | |
windows | |
all_MISA | |
all_MISA_ids | |
Constructions | |
def | __init__ (self, pdir, idir, odir, adir, verbose, prefix, to_align, file_specs, bound_pdb_complexes, pdb_id2path, windows) |
Default constructor. More... | |
Internal methods | |
def | gather_chains_by_MISA_id (self) |
Gather all the chain by the relevant MISA id. More... | |
def | run (self) |
Iterate over the MISA to run the processing More... | |
Construct and process all the MISAs. Gather the different chains by MISA id and run the processing of each of them.
def __init__ | ( | self, | |
pdir, | |||
idir, | |||
odir, | |||
adir, | |||
verbose, | |||
prefix, | |||
to_align, | |||
file_specs, | |||
bound_pdb_complexes, | |||
pdb_id2path, | |||
windows | |||
) |
Default constructor.
def gather_chains_by_MISA_id | ( | self | ) |
Gather all the chain by the relevant MISA id.
def run | ( | self | ) |
Iterate over the MISA to run the processing
adir |
all_MISA |
all_MISA_ids |
bound_pdb_complexes |
file_specs |
pdb_id2path |
prefix |
to_align |
verbose |
windows |