Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
Chain_instances Class Reference

Public Attributes

 S
 
 verbose
 

Constructions

def __init__ (self, verbose)
 Default constructor. More...
 
def fill_sequences (self, header, need_MSA, residue_mapping)
 Gather the present residues for each chain. More...
 

Basic Statistics

def apply_mapping (self, residue_mapping)
 Convert the indexing from the chain instances from the original numbering to the new numbering. More...
 

Detailed Description

Contain the chain sequence from every chain of the MISA id. Stored in a dictionnary (indexed by chain name) of dictionnaries (indexed by residue id).

Constructor & Destructor Documentation

◆ __init__()

def __init__ (   self,
  verbose 
)

Default constructor.

Member Function Documentation

◆ apply_mapping()

def apply_mapping (   self,
  residue_mapping 
)

Convert the indexing from the chain instances from the original numbering to the new numbering.

◆ fill_sequences()

def fill_sequences (   self,
  header,
  need_MSA,
  residue_mapping 
)

Gather the present residues for each chain.

Member Data Documentation

◆ S

S

◆ verbose

verbose