T_Tripeptide_loop_closure< Algebraic_Kernel > Class Template Reference

Computes the backbone coordinates of solutions to the Tripeptide loop closure with only phi and psi bond angles changing in internal coordinates. More...

#include <Tripeptide_loop_closure.hpp>

Modifiers
void	operator() (const Tripeptide_constraints &tlc_constraints, Solutions_embeddings &Coordinates, unsigned verbose=0, std::ostream &out=std::cout)
	Create a polypeptide chain in this protein. More...

Detailed Description

template<class Algebraic_Kernel>
class SBL::CSB::T_Tripeptide_loop_closure< Algebraic_Kernel >

Computes the backbone coordinates of solutions to the Tripeptide loop closure with only phi and psi bond angles changing in internal coordinates.

Computes the backbone coordinates of solutions to the Tripeptide loop closure with only phi and psi bond angles changing in internal coordinates.

Template Parameters

CGAL	Algebraic kernel used to specify the number types on polynomial object type used for the solver

Member Function Documentation

operator()()

void operator()	(	const Tripeptide_constraints &	tlc_constraints,
		Solutions_embeddings &	Coordinates,
		unsigned	verbose = 0,
		std::ostream &	out = std::cout
	)

Create a polypeptide chain in this protein.

Parameters

tlc_constraints	constraints in the internal coordinates and anchors of the loop closure
Coordinates	container for the cartesian embedding output
verbose	level for printout
out	printout location