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Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
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Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
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Classes | |
| class | T_EMD_distance_default< VerticesAccessor > |
| Default distance used by the EMD algorithm returning always the null distance. More... | |
| class | T_Earth_mover_distance< VerticesAccessor, DistanceFunctor > |
| Earth mover distance algorithm using lp_solve software for solving linear program problems. More... | |
| class | T_Earth_mover_distance_connectivity_constraints_checker< EarthMoverDistance > |
| Functor measuring the violation of the connectivity constraints of any Earth Mover Distance algorithm. More... | |
| class | T_EMD_LP_LP_format_writer< VerticesAccessor, DistanceFunctor > |
| Writing a LP problem using the LP format. More... | |
| class | T_EMD_LP_MPS_format_writer< VerticesAccessor, DistanceFunctor > |
| Writing a LP problem using the MPS format. More... | |
| class | T_EMD_CC_stat_triple< FT > |
| Internal data structure used to store information for the transportation plan. More... | |
| class | T_Earth_mover_distance_transportation_plan< VertexRep, FT > |
| Transportation plan for the Earth Mover Distance algorithms. More... | |
| class | T_Earth_mover_distance_vertices_accessor_graph< VertexType, MassType > |
| Accessors for weighted vertices stored in a boost graph. More... | |
| class | T_Earth_mover_distance_vertices_accessor_vector< VertexType, MassType > |
| Accessors for weighted vertices stored in a simple vector with no connectivity. More... | |
| class | T_Earth_mover_distance_with_connectivity_constraints< VerticesAccessor, DistanceFunctor > |
| Earth mover distance algorithm with connectivity constraints on the input data. More... | |
| class | T_Earth_mover_distance_module< ModuleTraits > |
| Application's module instantiating the eartyh mover distance algorithm. More... | |
1.9.1