Here is a list of all documented class members with links to the class documentation for each member:

- m -

• m_alt_discarded : T_Molecular_system_loader< Molecular_system_ >
• m_atm_discarded : T_Molecular_system_loader< Molecular_system_ >
• m_chain_discarded : T_Molecular_system_loader< Molecular_system_ >
• m_file_is_valid : T_Molecular_system_loader< Molecular_system_ >
• m_h_discarded : T_Molecular_system_loader< Molecular_system_ >
• m_hoh_discarded : T_Molecular_system_loader< Molecular_system_ >
• m_htm_discarded : T_Molecular_system_loader< Molecular_system_ >
• m_model_discarded : T_Molecular_system_loader< Molecular_system_ >
• m_temp_discarded : T_Molecular_system_loader< Molecular_system_ >
• make_add_molecule() : T_PyMOL_viewer< Dummy >
• make_add_molecules_with_index() : T_PyMOL_viewer< Dummy >
• make_condition() : T_Module_based_workflow< Dummy >
• make_conjunction() : T_Module_based_workflow< Dummy >
• make_dictionnary() : PALSE_DS_manipulator
• make_module_flow() : T_Module_based_workflow< Dummy >
• make_modules_path() : SBL_init_tools
• make_new_molecule() : T_PyMOL_viewer< Dummy >
• make_optional_module() : T_Module_based_workflow< Dummy >
• make_scripts() : BM_Batch
• make_set() : T_Union_find_base< T, VertexDS, InternalVertexTag >, T_Union_find_contains< T >, T_Union_find_contains_with_map< T >, T_Union_find_specializes< T >, Union_find_default
• mann_whitney() : PALSE_statistic_handle
• map_windows_no_MSA() : MISA
• Matrix_function : T_Alignment_engine_structures< StructureType, AlignerAlgorithm, FT, MolecularDistance >, T_Alignment_engine_structures_apurva< StructureType, FT, MolecularDistance >, T_Alignment_engine_structures_identity< StructureType, FT, MolecularDistance >, T_Alignment_engine_structures_iterative_identity< StructureType, FT, MolecularDistance >, T_Alignment_engine_structures_kpax< StructureType, FT, MolecularDistance >
• max_iteration : parameters
• max_node : parameters
• maximal_elements_begin() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• maximal_elements_end() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• Maximal_elements_iterator : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• MCI_MILP() : MCI_MILP_engine
• median() : PALSE_statistic_handle
• Mediated_interface : T_Molecular_interfaces_builder< ParticleWithSystemLabelTraits, MolecularModelClassifier >, T_Molecular_interfaces_traits< ParticleWithSystemLabelTraits, MolecularModel >, T_Molecular_interfaces_module< ModuleTraits >
• Mediated_interface_details_serialization : T_Mediated_interface_oserialization< MolecularInterfaceBuilder >
• Mediated_interface_statistics_serialization : T_Mediated_interface_oserialization< MolecularInterfaceBuilder >
• Mediator_label : T_Mediated_interface_data_structure_base< MolecularInterfaceDataStructure >, T_Molecular_interface_connected_component_data_structure< ParticleWithSystemLabelTraits, MolecularModel >, T_Molecular_interface_data_structure_base< MolecularInterfaceConnectedComponent >, T_Molecular_interfaces_builder< ParticleWithSystemLabelTraits, MolecularModelClassifier >, T_Molecular_structure_classifier< ParticleWithSystemLabelTraits, MolecularModelClassifier >, T_Tricolor_interface_data_structure_base< MolecularInterfaceDataStructure >, T_Particle_with_system_label< ParticleBase, PartnerLabelsTraits, MediatorLabelsTraits, ExtraLabelsTraits, IsSerializedLabel >, T_Particle_with_system_label_traits< ParticleTraitsBase, PartnerLabelsTraits, MediatorLabelsTraits, ExtraLabelsTraits, IsSerializedLabel >
• Mediator_label_classifier : T_Molecular_structure_classifier< ParticleWithSystemLabelTraits, MolecularModelClassifier >, T_Molecular_structure_classifier_module< ModuleTraits >
• Mediator_labels_traits : T_Mediated_interface_data_structure_base< MolecularInterfaceDataStructure >, T_Molecular_interface_connected_component_data_structure< ParticleWithSystemLabelTraits, MolecularModel >, T_Molecular_interface_data_structure_base< MolecularInterfaceConnectedComponent >, T_Tricolor_interface_data_structure_base< MolecularInterfaceDataStructure >, T_Particle_with_system_label< ParticleBase, PartnerLabelsTraits, MediatorLabelsTraits, ExtraLabelsTraits, IsSerializedLabel >, T_Particle_with_system_label_traits< ParticleTraitsBase, PartnerLabelsTraits, MediatorLabelsTraits, ExtraLabelsTraits, IsSerializedLabel >
• merge_in() : T_Stable_manifold_as_list_traits< Point >
• meta_cluster_sizes : D_Solution
• meta_clusters_begin() : T_Spanning_tree_solver< IntersectionGraph, StopCondition, SpanningTreeGenerator, Algorithm >
• minimal_elements_begin() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• minimal_elements_end() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• Minimal_elements_iterator : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• Minimal_oriented_spanning_forest : T_Minimal_oriented_spanning_forest_Boruvka< GraphType >
• Minimal_spanning_graph : T_Minimal_oriented_spanning_forest_Boruvka< GraphType >
• model_number() : Molecular_model< System_ >
• models() : Molecular_system< Items, Point >
• models_begin() : Molecular_system< Items, Point >
• models_end() : Molecular_system< Items, Point >
• Module_based_workflow() : Module_based_workflow
• Molecular_covalent_structure : T_Polynucleotide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >, T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
• Molecular_geometric_model_classifier : T_Molecular_structure_classifier< ParticleWithSystemLabelTraits, MolecularModelClassifier >, T_Molecular_structure_classifier_module< ModuleTraits >
• Molecular_interfaces_builder : T_Molecular_interfaces_module< ModuleTraits >
• Molecular_model : T_Molecular_structure_classifier< ParticleWithSystemLabelTraits, MolecularModelClassifier >, T_Molecular_structure_classifier_module< ModuleTraits >
• Molecular_structure : T_Molecular_structure_traits< ParticleWithSystemLabelTraits, MolecularStructure >
• Molecular_structure_classifier : T_Molecular_interfaces_module< ModuleTraits >, T_Molecular_structure_classifier_module< ModuleTraits >
• Molecular_structure_traits : T_Buried_surface_area_with_labels< ParticleWithSystemLabelTraits, ParticleBSARecord, FT >
• Molecular_system() : Molecular_system< Items, Point >, T_Tertiary_quaternary_structure_annotator< ParticleTraits, MolecularSystemLabelTraits >, T_Atom_with_flat_info_traits< GeometricKernel, SystemItems >, T_Atom_with_hierarchical_info_traits< GeometricKernel, SystemItems >, T_Pseudo_atom_per_residue_spec_with_flat_info_traits< GeometricKernel, SystemItems >
• Molecular_view() : T_Alignment_residue< ResidueBase >
• Motif_graph : T_RMSD_comb_edge_weighted< Structure, MolecularDistance >
• Motif_graph_part : T_RMSD_comb_edge_weighted< Structure, MolecularDistance >
• Motif_pairing : T_RMSD_comb_edge_weighted_module< ModuleTraits >
• Motif_pairings : T_RMSD_comb_edge_weighted< Structure, MolecularDistance >
• T_Mediated_interface_data_structure_base() : T_Mediated_interface_data_structure_base< MolecularInterfaceDataStructure >
• T_Mediated_interface_oserialization() : T_Mediated_interface_oserialization< MediatedInterface >, T_Mediated_interface_oserialization< MolecularInterfaceBuilder >
• T_Minimizer_Ipopt_parameters_without_constraint() : T_Minimizer_Ipopt_parameters_without_constraint< PointType, RealValueFunction, GradientFunction >
• T_Minimizer_parameters_without_constraint() : T_Minimizer_parameters_without_constraint< PointType, RealValueFunction, GradientFunction >
• T_Module_based_workflow() : T_Module_based_workflow< Dummy >
• T_Molecular_cartesian_coordinates() : T_Molecular_cartesian_coordinates< ConformationType, CovalentStructure >
• T_Molecular_interface_connected_component_data_structure() : T_Molecular_interface_connected_component_data_structure< ParticleWithSystemLabelTraits, MolecularModel >
• T_Molecular_interface_connected_component_oserialization() : T_Molecular_interface_connected_component_oserialization< MolecularInterface >
• T_Molecular_interface_data_structure_base() : T_Molecular_interface_data_structure_base< MolecularInterfaceConnectedComponent >
• T_Molecular_interface_oserialization() : T_Molecular_interface_oserialization< MolecularInterface >
• T_Molecular_interfaces_builder() : T_Molecular_interfaces_builder< ParticleWithSystemLabelTraits, MolecularModelClassifier >
• T_Molecular_primitive_internal_coordinates() : T_Molecular_primitive_internal_coordinates< ConformationType, CovalentStructure >
• T_Molecular_system_loader() : T_Molecular_system_loader< Molecular_system_ >
• T_Multiple_archives_serialization_xml_iarchive() : T_Multiple_archives_serialization_xml_iarchive< DataType, InputArchive >
• T_Multiple_archives_serialization_xml_oarchive() : T_Multiple_archives_serialization_xml_oarchive< DataType, OutputArchive, IsLessData >
• T_Multiple_archives_xml_archive_file_loader() : T_Multiple_archives_xml_archive_file_loader< SecondaryArchive, SecondaryData, SerializedData >