Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
T_Pseudo_atom_per_residue_spec_with_flat_info_and_annotations_traits< Annotations, GeometricKernel, SystemItems > Class Template Reference
Reference Manuals » ParticleTraits

Traits class defining pseudo-atoms traits (biophysical and geometric properties). Traits class defining pseudo-atoms traits (biophysical and geometric properties). More...

#include <Pseudo_atom_per_residue_spec_with_flat_info_and_annotations_traits.hpp>

Classes

class  Get_geometric_representation
 Functor returning a weighted point representing the coarse atom. More...

Public Types

typedef CGAL::Exact_predicates_inexact_constructions_kernel Geometric_kernel
 Geometric primitives for representing coarse atoms with exact coordinates, from the CGAL library.
typedef SBL::CSB::Molecular_system< SBL::CSB::System_items_with_coarse_grain, typename Geometric_kernel::Point_3 > Molecular_system
 Representation of a molecular system using the SBL library.
typedef Molecular_system::Atom Atom_base
 Representation of an atom of a molecular system.
typedef SBL::CSB::Coarse_atom< Atom_base, typename Geometric_kernel::Point_3 > Atom
 Rerpesentation of a coarse atom of a molecular system.

Detailed Description

template<class Annotations = void, class GeometricKernel = CGAL::Exact_predicates_inexact_constructions_kernel, class SystemItems = SBL::CSB::System_items_with_coarse_grain>
class SBL::Models::T_Pseudo_atom_per_residue_spec_with_flat_info_and_annotations_traits< Annotations, GeometricKernel, SystemItems >

Traits class defining pseudo-atoms traits (biophysical and geometric properties). Traits class defining pseudo-atoms traits (biophysical and geometric properties).

Member Typedef Documentation

◆ Atom

typedef SBL::CSB::Coarse_atom<Atom_base, typename Geometric_kernel::Point_3> Atom
inherited

Rerpesentation of a coarse atom of a molecular system.

◆ Atom_base

typedef Molecular_system::Atom Atom_base
inherited

Representation of an atom of a molecular system.

◆ Geometric_kernel

typedef CGAL::Exact_predicates_inexact_constructions_kernel Geometric_kernel
inherited

Geometric primitives for representing coarse atoms with exact coordinates, from the CGAL library.

◆ Molecular_system

typedef SBL::CSB::Molecular_system<SBL::CSB::System_items_with_coarse_grain, typename Geometric_kernel::Point_3> Molecular_system
inherited

Representation of a molecular system using the SBL library.