T_Disulfide_bonds_finder< ParticleTraits > Class Template Reference

#include <Disulfide_bonds_finder.hpp>

Classes
struct	Disulfide_bond
struct	Residue_info

Public Types
typedef ParticleTraits	Particle_traits
typedef T_Disulfide_bonds_finder< Particle_traits >	Self
typedef Particle_traits::Molecular_system	Molecular_system
typedef Molecular_system::Residue	Residue
typedef Residue::Atom	Atom
typedef Residue::Atoms_iterator	Atoms_iterator
typedef Residue::Atoms_const_iterator	Atoms_const_iterator
typedef Particle_traits::Get_geometric_representation	Get_geometric_representation
typedef Get_geometric_representation::Point_3	Point_3
typedef std::vector< Disulfide_bond >	Disulfide_bonds
typedef std::vector< const Residue * >	Structure

Public Member Functions
	T_Disulfide_bonds_finder ()
void	find_disulfide_bonds (unsigned verbose=2, std::ostream &log=std::cout)
template<class InputIterator >
void	add_residues (InputIterator begin, InputIterator end)
const Disulfide_bonds &	get_disulfide_bonds (void) const
template<class Archive >
void	serialize (Archive &ar, const unsigned BOOST_PFTO int version) const

Member Typedef Documentation

Atom

typedef Residue::Atom Atom

Atoms_const_iterator

typedef Residue::Atoms_const_iterator Atoms_const_iterator

Atoms_iterator

typedef Residue::Atoms_iterator Atoms_iterator

Disulfide_bonds

typedef std::vector<Disulfide_bond> Disulfide_bonds

Get_geometric_representation

typedef Particle_traits::Get_geometric_representation Get_geometric_representation

Molecular_system

typedef Particle_traits::Molecular_system Molecular_system

Particle_traits

typedef ParticleTraits Particle_traits

Point_3

typedef Get_geometric_representation::Point_3 Point_3

Residue

typedef Molecular_system::Residue Residue

Self

typedef T_Disulfide_bonds_finder<Particle_traits> Self

Structure

typedef std::vector<const Residue*> Structure

Constructor & Destructor Documentation

T_Disulfide_bonds_finder()

T_Disulfide_bonds_finder ( )

inline

Member Function Documentation

add_residues()

void add_residues	(	InputIterator	begin,
		InputIterator	end
	)

find_disulfide_bonds()

void find_disulfide_bonds	(	unsigned	verbose = 2,
		std::ostream &	log = std::cout
	)

get_disulfide_bonds()

const T_Disulfide_bonds_finder< ParticleTraits >::Disulfide_bonds & get_disulfide_bonds

(

void

)

const

serialize()

void serialize ( Archive &  ar, const unsigned BOOST_PFTO int  version  ) const

inline