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Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
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Set of input file options with multiple values. More...
Options Management | |
| _add_tuple_option (self, names, common_regex, regexs) | |
| Add the name of an option into the list and the regex represented the list of files (default is all files). | |
| _add_option (self, name, regex=".*") | |
| Add the name of an option into the list and the regex represented the list of files (default is all files). | |
| add_option_from_nvp_list (self, nvp_list) | |
| Add a nvp to the options list. | |
| build_options_list (self, dataset, association_rules) | |
| From the input dataset and association rules, create the tuples of files. | |
| get_options_list (self) | |
| Return the list of possible combinations of IFO. | |
Set of input file options with multiple values.
This data structure provides the method get_options_list allowing to return all possible tuples of input files for a run.
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protected |
Add the name of an option into the list and the regex represented the list of files (default is all files).
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protected |
Add the name of an option into the list and the regex represented the list of files (default is all files).
| add_option_from_nvp_list | ( | self, | |
| nvp_list ) |
Add a nvp to the options list.
| build_options_list | ( | self, | |
| dataset, | |||
| association_rules ) |
From the input dataset and association rules, create the tuples of files.
Note that the number of option names determine the arity, i.e the size of a tuple of input files.
| get_options_list | ( | self | ) |
Return the list of possible combinations of IFO.