SBL.Molecular_distances_flexible-python Namespace Reference

Functions
def	cmp_proteins_with_aligner_n_pc_one_protein (odir, aligner, aligner_tag)
	2.3 Comparing n polypeptide chains of one protein More...
def	test_23 ()
def	cmp_proteins_with_aligner_two_pc (odir, aligner, aligner_tag)
def	test_24 ()
def	cmp_proteins_with_aligner_n_pc_two_proteins (odir, aligner, aligner_tag)
	2.5 Comparing n polypeptide chains of two proteins More...
def	test_25 ()
def	cmp_proteins_with_aligner_n_pc (odir, aligner, aligner_tag)
	2.6 Comparing n polypeptide chains More...
def	test_26 ()
def	cmp_proteins_with_aligner_m_pc_n_chains (odir, aligner, aligner_tag)
	2.7 Comparing m polypeptide chains of n proteins 2.7 Comparing m polypeptide chains of n proteins: m-pc-n-proteins More...
def	test_27 ()
def	cmp_proteins_with_motifs ()

Variables
string	odir = "results-new"
list	sdirs = ["n-pc-one-protein", "two-pc", "n-pc-two-proteins", "n-pc", "m-pc-n-proteins", "motifs"]
string	w = "%s/%s" % (odir, sdir)

Function Documentation

cmp_proteins_with_aligner_m_pc_n_chains()

def SBL.Molecular_distances_flexible-python.cmp_proteins_with_aligner_m_pc_n_chains	(		odir,
			aligner,
			aligner_tag
	)

2.7 Comparing m polypeptide chains of n proteins 2.7 Comparing m polypeptide chains of n proteins: m-pc-n-proteins

cmp_proteins_with_aligner_n_pc()

def SBL.Molecular_distances_flexible-python.cmp_proteins_with_aligner_n_pc	(		odir,
			aligner,
			aligner_tag
	)

2.6 Comparing n polypeptide chains

cmp_proteins_with_aligner_n_pc_one_protein()

def SBL.Molecular_distances_flexible-python.cmp_proteins_with_aligner_n_pc_one_protein	(		odir,
			aligner,
			aligner_tag
	)

2.3 Comparing n polypeptide chains of one protein

cmp_proteins_with_aligner_n_pc_two_proteins()

def SBL.Molecular_distances_flexible-python.cmp_proteins_with_aligner_n_pc_two_proteins	(		odir,
			aligner,
			aligner_tag
	)

2.5 Comparing n polypeptide chains of two proteins

cmp_proteins_with_aligner_two_pc()

def SBL.Molecular_distances_flexible-python.cmp_proteins_with_aligner_two_pc	(		odir,
			aligner,
			aligner_tag
	)

cmp_proteins_with_motifs()

def SBL.Molecular_distances_flexible-python.cmp_proteins_with_motifs

(

)

test_23()

def SBL.Molecular_distances_flexible-python.test_23

(

)

test_24()

def SBL.Molecular_distances_flexible-python.test_24

(

)

test_25()

def SBL.Molecular_distances_flexible-python.test_25

(

)

test_26()

def SBL.Molecular_distances_flexible-python.test_26

(

)

test_27()

def SBL.Molecular_distances_flexible-python.test_27

(

)

Variable Documentation

odir

string odir = "results-new"

sdirs

list sdirs = ["n-pc-one-protein", "two-pc", "n-pc-two-proteins", "n-pc", "m-pc-n-proteins", "motifs"]

w

string w = "%s/%s" % (odir, sdir)