Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
SBL::CADS Namespace Reference

Typedefs

typedef T_Random_spanning_tree_property Random_spanning_tree_property
 

Enumerations

enum  EMD_algorithm_type { EMD_regular, EMD_star }
 
enum  EMD_edge_selection_strategy { EMD_min_cost, EMD_first_found }
 
enum  EMD_recursion_mode { EMD_no_recursion, EMD_coarse, EMD_refined }
 

Functions

template<class VerticesAccessor , class DistanceFunctor >
void T_Earth_mover_distance< VerticesAccessor, DistanceFunctor >dump_LP_into_MPS_file (Vertices_container &source, Vertices_container &demand, Transportation_plan &tplan, const std::string &ofname, std::ostream &out_stats, unsigned verbose) const
 

Typedef Documentation

◆ Random_spanning_tree_property

Enumeration Type Documentation

◆ EMD_algorithm_type

Enumerator
EMD_regular 
EMD_star 

◆ EMD_edge_selection_strategy

Enumerator
EMD_min_cost 
EMD_first_found 

◆ EMD_recursion_mode

Enumerator
EMD_no_recursion 
EMD_coarse 
EMD_refined 

Function Documentation

◆ T_Earth_mover_distance< VerticesAccessor, DistanceFunctor >dump_LP_into_MPS_file()

void SBL::CADS::T_Earth_mover_distance< VerticesAccessor, DistanceFunctor >dump_LP_into_MPS_file ( Vertices_container &  source,
Vertices_container &  demand,
Transportation_plan &  tplan,
const std::string &  ofname,
std::ostream &  out_stats,
unsigned  verbose 
) const