Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
Here is a list of all documented typedefs with links to the class documentation for each member:
- a -
Algebraic_kernel_interval :
T_Union_of_balls_surface_volume_3_module< ModuleTraits, OutputArchive >
Aligned_pair :
T_Alignment_engine< SequenceOrStructure, AlignerAlgorithm, FT >
,
T_Alignment_engine_structures< StructureType, AlignerAlgorithm, FT, MolecularDistance >
,
T_Alignment_engine_structures_apurva< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_iterative_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_kpax< StructureType, FT, MolecularDistance >
AlignedSequences :
T_Aligner_sequence_seqan_wrapper< SeqanSequenceConverter, FreeEndsAlignment, ScoreType, SeqanUnitType, SeqanCustomMatrix, SeqanAlgorithm >
Aligner_algorithm :
T_Alignment_engine< SequenceOrStructure, AlignerAlgorithm, FT >
,
T_Alignment_sequences_module< ModuleTraits, AlignmentEngineSequences >
,
T_Alignment_structures_module< ModuleTraits, AlignmentEngineStructures >
Alignment_engine :
T_Alignment_sequences_module< ModuleTraits, AlignmentEngineSequences >
,
T_Alignment_structures_module< ModuleTraits, AlignmentEngineStructures >
Alignment_type :
T_Alignment_engine< SequenceOrStructure, AlignerAlgorithm, FT >
,
T_Alignment_engine_structures< StructureType, AlignerAlgorithm, FT, MolecularDistance >
,
T_Alignment_engine_structures_apurva< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_iterative_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_kpax< StructureType, FT, MolecularDistance >
,
T_Alignment_sequences_module< ModuleTraits, AlignmentEngineSequences >
,
T_Alignment_structures_module< ModuleTraits, AlignmentEngineStructures >
Alignment_unit :
T_Alignment_engine< SequenceOrStructure, AlignerAlgorithm, FT >
,
T_Alignment_engine_structures< StructureType, AlignerAlgorithm, FT, MolecularDistance >
,
T_Alignment_engine_structures_apurva< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_iterative_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_kpax< StructureType, FT, MolecularDistance >
,
T_Alignment_sequence< ResidueBase >
Alignment_unit_name :
T_Alignment_engine< SequenceOrStructure, AlignerAlgorithm, FT >
,
T_Alignment_engine_structures< StructureType, AlignerAlgorithm, FT, MolecularDistance >
,
T_Alignment_engine_structures_apurva< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_iterative_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_kpax< StructureType, FT, MolecularDistance >
,
T_Alignment_sequence< ResidueBase >
Alignment_unit_rep :
T_Alignment_engine< SequenceOrStructure, AlignerAlgorithm, FT >
,
T_Alignment_engine_structures< StructureType, AlignerAlgorithm, FT, MolecularDistance >
,
T_Alignment_engine_structures_apurva< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_iterative_identity< StructureType, FT, MolecularDistance >
,
T_Alignment_engine_structures_kpax< StructureType, FT, MolecularDistance >
,
T_Alignment_sequence< ResidueBase >
Alpha_complex :
T_Buried_surface_area_with_labels< ParticleWithSystemLabelTraits, ParticleBSARecord, FT >
,
T_Buried_surface_area_without_label< ParticleTraits, FT >
,
T_Alpha_complex_of_molecular_model_module< ModuleTraits >
,
T_Buried_surface_area_with_labels_module< ModuleTraits >
,
T_Buried_surface_area_without_label_module< ModuleTraits >
,
T_Union_of_balls_boundary_3_module< ModuleTraits, ExactNT >
,
T_Union_of_balls_surface_volume_3_module< ModuleTraits, OutputArchive >
Alpha_complex_of_molecular_model_traits :
T_Triangulation_of_molecular_model< ParticleTraits, TAlphaComplexVertexBase, TAlphaComplexCellBase >
Alpha_const_iterator :
T_Polynucleotide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Alpha_iterator :
T_Polynucleotide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Annotator_default :
T_Atom_with_hierarchical_info_and_annotations_traits< Annotations, GeometricKernel, SystemItems >
,
T_Geometric_particle_traits< GeometricKernel, GeometricRepresentation >
Approximated_spatial_search_engine :
T_Spatial_search_module< ModuleTraits, ApproximatedSpatialSearchEngine >
Archive_type :
T_RMSD_comb_edge_weighted_module< ModuleTraits >
Atom :
T_Polynucleotide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
,
T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
,
T_Atom_with_flat_info_traits< GeometricKernel, SystemItems >
,
T_Pseudo_atom_per_residue_spec_with_flat_info_traits< GeometricKernel, SystemItems >
Atom_base :
T_Pseudo_atom_per_residue_spec_with_flat_info_traits< GeometricKernel, SystemItems >
Atoms_const_iterator :
T_Polynucleotide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
,
T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Atoms_iterator :
T_Polynucleotide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
,
T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
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