Here is a list of all documented functions with links to the class documentation for each member:

- i -

• identifier() : Molecular_secondary_structure_element< System >
• improper_angles_begin() : T_Molecular_covalent_structure< Particle_info_ >, T_Molecular_covalent_structure_optimal< ParticleInfo >
• improper_angles_end() : T_Molecular_covalent_structure< Particle_info_ >, T_Molecular_covalent_structure_optimal< ParticleInfo >
• increment_maximal_height() : T_Directed_acyclic_graph_with_layers< VertexProperty, EdgeProperty >
• independent_set_begin() : T_Union_find_base< T, VertexDS, InternalVertexTag >, T_Union_find_contains_with_map< T >
• independent_set_end() : T_Union_find_base< T, VertexDS, InternalVertexTag >, T_Union_find_contains_with_map< T >
• index() : Molecular_SS_bond< System >, Molecular_system< Items, Point >
• initial_chain_identifier() : Molecular_secondary_structure_element< System >
• initial_residue_insertion_code() : Molecular_secondary_structure_element< System >
• initial_residue_name() : Molecular_secondary_structure_element< System >
• initial_residue_sequence_number() : Molecular_secondary_structure_element< System >
• initialize_header() : MISA
• insert() : T_Triangulation_of_molecular_model< ParticleTraits, TAlphaComplexVertexBase, TAlphaComplexCellBase >
• insertion_code() : Molecular_residue< System >
• is_abstract_critical_vertex() : T_Morse_Smale_Witten_chain_complex< MorseFunction, StableManifoldTraits >
• is_ancestor() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >, T_Directed_acyclic_graph_with_layers< VertexProperty, EdgeProperty >, T_Hierarchical_labels_forest< MolecularSystemLabelsTraits >
• is_brk_cst_col_node() : problem< graph, dp_mat, lambda_mat, parameter >
• is_brk_cst_row_node() : problem< graph, dp_mat, lambda_mat, parameter >
• is_cloning() : T_PyMOL_viewer< Dummy >
• is_condition_module() : Module_base
• is_data_value_in_tree() : PALSE_xml_DB
• is_degenerated() : T_Union_of_balls_boundary_3_face< Refs, WeightedAlphaComplex3 >, T_Union_of_balls_boundary_3_half_edge< Refs, WeightedAlphaComplex3 >, T_Union_of_balls_boundary_3_vertex< Refs, WeightedAlphaComplex3 >
• is_degenerated_full_circle() : T_Union_of_balls_boundary_3_half_edge< Refs, WeightedAlphaComplex3 >
• is_empty() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >, T_Directed_acyclic_graph_with_layers< VertexProperty, EdgeProperty >, T_Union_find_base< T, VertexDS, InternalVertexTag >, T_Union_find_contains_with_map< T >, T_Molecular_interface_connected_component_data_structure< ParticleWithSystemLabelTraits, MolecularModel >, T_Molecular_interface_data_structure_base< MolecularInterfaceConnectedComponent >
• is_energy_in_range() : T_WL_Data_Structure_Internal< Conformation, Bin_properties, DS_snapshot_ >
• is_equal() : Interface_strings
• is_face_of() : T_Morse_Smale_Witten_chain_complex< MorseFunction, StableManifoldTraits >
• is_full_circle() : T_Union_of_balls_boundary_3_half_edge< Refs, WeightedAlphaComplex3 >
• is_full_sphere() : T_Union_of_balls_boundary_3_face< Refs, WeightedAlphaComplex3 >
• is_fully_embedded() : T_Nucleic_acid_representation< PolynucleotideChain >, T_Protein_representation< PolypeptideChain >
• is_hetatm() : Molecular_atom< System_, Point >
• is_incident_to_degenerated_vertex() : T_Union_of_balls_boundary_3_half_edge< Refs, WeightedAlphaComplex3 >
• is_leader() : T_Union_find_base< T, VertexDS, InternalVertexTag >, T_Union_find_contains_with_map< T >
• is_loaded_hydrogen() : T_XTC_file_loader< ConformationType, ConformationBuilder, ESBTLMolecularSystem, PDBLineFormat >
• is_loaded_water() : T_XTC_file_loader< ConformationType, ConformationBuilder, ESBTLMolecularSystem, PDBLineFormat >
• is_logical_module() : Module_base
• is_lower() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• is_maximal_element() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• is_maximal_root_oriented() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• is_minimal_element() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >
• is_modules_collection() : Module_base
• is_parent() : T_Directed_acyclic_graph< VertexProperty, EdgeProperty >, T_Directed_acyclic_graph_with_layers< VertexProperty, EdgeProperty >
• is_primitive_label() : T_Hierarchical_labels_forest< MolecularSystemLabelsTraits >
• is_pure_abstract_critical_vertex() : T_Morse_Smale_Witten_chain_complex< MorseFunction, StableManifoldTraits >
• is_residue_heavy_atoms_embedded() : T_Polynucleotide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >, T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
• is_runnable() : Module_base, T_Alignment_sequences_module< ModuleTraits, AlignmentEngineSequences >, T_Alignment_structures_module< ModuleTraits, AlignmentEngineStructures >, T_Alpha_complex_of_molecular_model_module< ModuleTraits >, T_Buried_surface_area_with_labels_module< ModuleTraits >, T_Buried_surface_area_without_label_module< ModuleTraits >, T_Cluster_engine_module< ModuleTraits >, T_Earth_mover_distance_module< ModuleTraits >, T_Module_based_workflow< Dummy >, T_Module_condition< Module, Predicate >, T_Module_conjunction< ModuleOrLoader1, ModuleOrLoader2 >, T_Molecular_interfaces_module< ModuleTraits >, T_Molecular_structure_classifier_module< ModuleTraits >, T_Morse_theory_based_analyzer_for_NNG_module< ModuleTraits >, T_Morse_theory_based_analyzer_for_vertex_weighted_graph_module< ModuleTraits, GraphType, GetWeight >, T_Morse_theory_based_analyzer_for_weighted_graph_module< ModuleTraits, GraphType, GetWeight >, T_Morse_theory_based_analyzer_module< ModuleTraits, MorseSmaleWittenChainComplex >, T_Nearest_neighbors_graph_builder_module< ModuleTraits >, T_RMSD_comb_edge_weighted_module< ModuleTraits >, T_Spatial_search_module< ModuleTraits, ApproximatedSpatialSearchEngine >, T_Tertiary_quaternary_structure_annotator_module< ModuleTraits >, T_Union_of_balls_boundary_3_module< ModuleTraits, ExactNT >, T_Union_of_balls_boundary_patch_shelling_3_module< ModuleTraits, OutputArchive >, T_Union_of_balls_mesh_3_module< ModuleTraits >, T_Union_of_balls_surface_volume_3_module< ModuleTraits, OutputArchive >
• is_singleton() : T_Union_find_base< T, VertexDS, InternalVertexTag >, T_Union_find_contains_with_map< T >
• is_splitted() : problem< graph, dp_mat, lambda_mat, parameter >
• is_transparent() : T_PyMOL_viewer< Dummy >
• is_valid_solution() : MCI_set_of_contacts
• is_valid_union_find_index() : Union_find_vertex_data_structure_base
• is_valid_workflow() : T_Module_based_workflow< Dummy >
• is_visible() : T_PyMOL_viewer< Dummy >