Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
T_Seed_selector_k_means_plus_plus< PointType, VectorType, Cost > Class Template Reference
Reference Manuals » Seeding

Select seeds with D2 weighting. More...

#include <Seed_selectors.hpp>

Detailed Description

template<class PointType, class VectorType, class Cost>
class SBL::GT::T_Seed_selector_k_means_plus_plus< PointType, VectorType, Cost >

Select seeds with D2 weighting.

Multiple candidates are sampled for each seed and compared using seed inertia i.e. Sum of Squared Errors of datapoints to their closest seed

Template Parameters
PointTypeRepresentation of a point.
VectorTypeRepresentation of a vector.
CostCompute the cost for a point and a center of mass.