Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
Earth_mover_distance

Earth mover distance solver Reference ManualUser Manual . Authors: F. Cazals and T. Dreyfus and D. Mazauric

Main classes:

  • T_Earth_mover_distance : Earth mover distance algorithm using lp_solve software for solving linear program problems
  • T_Earth_mover_distance_transportation_plan : Transportation plan for the Earth Mover Distance algorithms
  • T_Earth_mover_distance_vertices_accessor_graph : Accessors for weighted vertices stored in a boost graph
  • T_Earth_mover_distance_vertices_accessor_vector : Accessors for weighted vertices stored in a simple vector with no connectivity
  • T_Earth_mover_distance_with_connectivity_constraints : Earth mover distance algorithm with connectivity constraints on the input data