T_Contact_Map_T< ParticleContainer > Class Template Reference

#include <contact_map.h>

Public Types
typedef ParticleContainer	Particle_container
typedef ParticleContainer::value_type	Particle_type
typedef T_Contact_Map_T< ParticleContainer >	Contact_Map_T

Public Member Functions
	T_Contact_Map_T ()
	~T_Contact_Map_T ()
int	load_particles (Particle_container particles, double d_threshold)
int	load_rcsb_pdb_file (string &filename, char chain, double d_threshold)
int	load_contact_map_file (string &filename)
int	get_nb_aa ()
vector< vector< int > > &	get_aa_contact_map ()
int	get_nb_aa_contact ()
int	get_nb_sse ()
vector< vector< int > > &	get_sse_contact_map ()
int	get_sum_sse_edge ()
vector< int > &	get_sse_beg ()
vector< int > &	get_sse_end ()
vector< char > &	get_sse_type ()
vector< int > &	get_degree ()
int	get_pdb_number (int cm_nb)

Member Typedef Documentation

Contact_Map_T

typedef T_Contact_Map_T<ParticleContainer> Contact_Map_T

Particle_container

typedef ParticleContainer Particle_container

Particle_type

typedef ParticleContainer::value_type Particle_type

Constructor & Destructor Documentation

T_Contact_Map_T()

T_Contact_Map_T ( )

inline

~T_Contact_Map_T()

~T_Contact_Map_T ( )

inline

Member Function Documentation

get_aa_contact_map()

vector<vector<int> >& get_aa_contact_map ( )

inline

get_degree()

vector<int>& get_degree ( )

inline

get_nb_aa()

int get_nb_aa ( )

inline

get_nb_aa_contact()

int get_nb_aa_contact ( )

inline

get_nb_sse()

int get_nb_sse ( )

inline

get_pdb_number()

int get_pdb_number ( int  cm_nb )

inline

get_sse_beg()

vector<int>& get_sse_beg ( )

inline

get_sse_contact_map()

vector<vector<int> >& get_sse_contact_map ( )

inline

get_sse_end()

vector<int>& get_sse_end ( )

inline

get_sse_type()

vector<char>& get_sse_type ( )

inline

get_sum_sse_edge()

int get_sum_sse_edge ( )

inline

load_contact_map_file()

int load_contact_map_file ( string &  filename )

inline

load_particles()

int load_particles ( Particle_container  particles, double  d_threshold  )

inline

load_rcsb_pdb_file()

int load_rcsb_pdb_file ( string &  filename, char  chain, double  d_threshold  )

inline