Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
Linear_polymer_representation.hpp

  • as the name suggest, a linear polymer. requires providing the patter defining the backbone, e.g. [N, CA, C] for proteins. this pattern is used in particular by the backbone iterator

Polynucleotide_chain_representation.hpp

  • A class which inherits from Linear_polymer_representation and provides NA specific functionalities.

Polypeptide_chain_representation_generic.hpp

  • A class which inherits from Linear_polymer_representation and provides protein specific functionalities.
  • tmp class here to experiment with the new design. results should match those deliveved by sbl-protein-info.cpp

Nucleic_acid_representation.hpp

  • A class aggregating instances of Polynucleotide_chain_representation