Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
T_RST_MST_D_Family_matching_module< ModuleTraits > Member List

This is the complete list of members for T_RST_MST_D_Family_matching_module< ModuleTraits >, including all inherited members.

add_options(void) constT_RST_MST_D_Family_matching_module< ModuleTraits >inlinevirtual
Base typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
check_filesystem_directory_exists(const std::string &output_prefix)Module_baseinline
check_options(std::string &message) constT_RST_MST_D_Family_matching_module< ModuleTraits >inlinevirtual
clone(const Self_ *s) constModule_baseinline
Cluster_writer typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
D_Solution typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
delete_options(void)T_Module_option_description< Dummy >inlinestatic
Edge_weight_map typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
Edge_weight_writer typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
get_graph()T_RST_MST_D_Family_matching_module< ModuleTraits >inline
get_module_instance_name(void) constModule_baseinline
get_name(void) constT_RST_MST_D_Family_matching_module< ModuleTraits >inlinevirtual
get_num_meta_clusters()T_RST_MST_D_Family_matching_module< ModuleTraits >inline
get_options(void)T_Module_option_description< Dummy >inlinestatic
get_output_prefix(void) constT_Module_option_description< Dummy >inlinevirtual
get_report_mode(void) constModule_baseinline
has_options(void)T_Module_option_description< Dummy >inlinestatic
initialize_options(const std::string &caption)T_Module_option_description< Dummy >inlinestatic
Intersection_graph typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
Intersection_graph_edge typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
Intersection_graph_vertex typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
is_condition_module(void) constModule_baseinlineprotectedvirtual
is_logical_module(void) constModule_baseinlineprotectedvirtual
is_modules_collection(void) constModule_baseinlineprotectedvirtual
is_runnable() constT_RST_MST_D_Family_matching_module< ModuleTraits >inlinevirtual
Module_base(void)Module_baseinline
MST_Solution_computer typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
operator()(void)Module_baseinlineprotectedvirtual
print_graph(std::ofstream &out)T_RST_MST_D_Family_matching_module< ModuleTraits >inline
report(const std::string &output_prefix)Module_baseinlinevirtual
RST_Solution_computer typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
run(unsigned verbose, std::ostream &out)T_RST_MST_D_Family_matching_module< ModuleTraits >inlinevirtual
Self typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
serialize(Archive &ar, const unsigned BOOST_PFTO int version)T_RST_MST_D_Family_matching_module< ModuleTraits >inline
set_module_instance_name(const std::string &module_instance_name)Module_baseinline
set_report_mode(std::ios_base::openmode report_mode)Module_baseinline
set_report_mode(std::ios_base::openmode &report_mode)Module_baseinline
Solution_type typedefT_RST_MST_D_Family_matching_module< ModuleTraits >
statistics(std::ostream &out)T_RST_MST_D_Family_matching_module< ModuleTraits >inlinevirtual
T_RST_MST_D_Family_matching_module(void)T_RST_MST_D_Family_matching_module< ModuleTraits >
T_RST_MST_D_Family_matching_module(const Self &other)T_RST_MST_D_Family_matching_module< ModuleTraits >
write_meta_cluster_mapping(std::ofstream &out, unsigned clustering_index)T_RST_MST_D_Family_matching_module< ModuleTraits >inline
~Module_base(void)Module_baseinlinevirtual