Structural Bioinformatics Library
Template C++ / Python API for developping structural bioinformatics applications.
T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType > Member List

This is the complete list of members for T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >, including all inherited members.

Atom typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
atoms_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
atoms_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
atoms_begin(Residue &res)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
atoms_begin(const Residue &res) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Atoms_const_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
atoms_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
atoms_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
atoms_end(Residue &res)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
atoms_end(const Residue &res) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Atoms_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
backbone_begin(int cc=-1)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
backbone_begin(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
backbone_end(int cc=-1)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
backbone_end(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
bond_angles_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
bond_angles_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
bond_angles_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
bond_angles_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
bonds_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
bonds_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
bonds_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
bonds_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Calpha_const_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Calpha_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
calphas_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
calphas_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
calphas_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
calphas_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Chain typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
compute_heavy_atoms_center_of_mass(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Conformation_type typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
dihedral_angles_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
dihedral_angles_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
dihedral_angles_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
dihedral_angles_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
FT typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
get_chain_id() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
get_conformation() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_coordinates(const Atom &a) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_covalent_structure() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_first_residue(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_last_residue(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_number_of_bonds(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_number_of_components() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_number_of_embedded_bonds(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_number_of_embedded_particles(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_number_of_particles(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_number_of_residues() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_omega_angle(const Residue &res) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_omega_angle(unsigned resn) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_particle_rep(const Atom &a) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_phi_angle(const Residue &res) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_phi_angle(unsigned resn) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_psi_angle(const Residue &res) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_psi_angle(unsigned resn) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_x(const Atom &a) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_x(const Atom &a)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_y(const Atom &a) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_y(const Atom &a)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_z(const Atom &a) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
get_z(const Atom &a)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
heavy_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
heavy_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Heavy_const_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
heavy_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
heavy_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Heavy_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
incident_atoms_begin(const Atom &a)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
incident_atoms_begin(const Atom &a) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
incident_atoms_end(const Atom &a)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
incident_atoms_end(const Atom &a) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
is_fully_embedded(int cc=-1) constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Molecular_covalent_structure typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Molecular_model typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Molecular_system typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
omega_angles_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
omega_angles_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
omega_angles_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
omega_angles_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Omega_const_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Omega_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Particle_traits typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
phi_angles_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
phi_angles_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
phi_angles_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
phi_angles_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Phi_const_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Phi_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Point_3 typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
psi_angles_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
psi_angles_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
psi_angles_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
psi_angles_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Psi_const_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Psi_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Residue typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
residues_begin()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
residues_begin() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Residues_const_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
residues_end()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
residues_end() constT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
Residues_iterator typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
Self typedefT_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
set_conformation(Conformation_type &C)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >inline
T_Polypeptide_chain_representation()T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >
T_Polypeptide_chain_representation(Chain &c, Molecular_covalent_structure &s, const Conformation_type &mc)T_Polypeptide_chain_representation< ParticleTraits, MolecularCovalentStructure, ConformationType >